Anchored HTML File of EIDs

	WEB-based GEne SeT AnaLysis Toolkit

	*Translating gene lists into biological insights...*

User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID.
The second row lists the following statistics:

C: the number of reference genes in the category
O: the number of genes in the gene set and also in the category
E: the expected number in the category
R: ratio of enrichment
rawP: p value from hypergeometric test
adjP: p value adjusted by the multiple test adjustment

Finally, genes in the pathway are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:KEGG pathway Name:Spliceosome ID:03040
C=127; O=3; E=0.39; R=7.78; rawP=0.0069; adjP=0.0138
Index	UserID	Value	Gene Symbol	Gene Name	EntrezGene	Ensembl
1	ENSG00000119707	NA	RBM25	RNA binding motif protein 25	58517	ENSG00000119707
2	ENSG00000115524	NA	SF3B1	splicing factor 3b, subunit 1, 155kDa	23451	ENSG00000115524
3	ENSG00000163714	NA	U2SURP	U2 snRNP-associated SURP domain containing	23350	ENSG00000163714

Database:KEGG pathway Name:Metabolic pathways ID:01100
C=1130; O=3; E=3.43; R=0.87; rawP=1.0000; adjP=1.0000
Index	UserID	Value	Gene Symbol	Gene Name	EntrezGene	Ensembl
1	ENSG00000102780	NA	DGKH	diacylglycerol kinase, eta	160851	ENSG00000102780
2	ENSG00000157350	NA	ST3GAL2	ST3 beta-galactoside alpha-2,3-sialyltransferase 2	6483	ENSG00000157350
3	ENSG00000214013	NA	GANC	glucosidase, alpha; neutral C	2595	ENSG00000214013

WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).